Neema Jamshidi : rechercher sur Z-Library

Sebastian Obrzut, Neema Jamshidi, Afshin Karimi, Ulrika Birgersdotter-Green, Carl Hoh

Année:

2011

Langue:

english

Fichier:

PDF, 1.80 MB

english, 2011

Imaging and Modeling of Myocardial Metabolism

Journal:

Journal of Cardiovascular Translational Research

Année:

2010

Langue:

english

Fichier:

PDF, 479 KB

english, 2010

Assessment of Metabolic Phenotypes in Patients with Non-ischemic Dilated Cardiomyopathy Undergoing Cardiac Resynchronization Therapy

Sebastian Obrzut, Jay Tiongson, Neema Jamshidi, Huy Minh Phan, Carl Hoh, Ulrika Birgersdotter-Green

Journal:

Journal of Cardiovascular Translational Research

Année:

2010

Langue:

english

Fichier:

PDF, 181 KB

english, 2010

Investigating the metabolic capabilities ofMycobacterium tuberculosisH37Rv using thein silicostrainiNJ661 and proposing alternative drug targets

Neema Jamshidi, Bernhard Ø Palsson

Journal:

Neema Jamshidi, Bernhard O Palsson

Année:

2007

Langue:

english

Fichier:

PDF, 1.10 MB

english, 2007

Usingin silicomodels to simulate dual perturbation experiments: procedure development and interpretation of outcomes

Journal:

Martin I Sigurdsson, Neema Jamshidi, Eirikur Steingrimsson, Ines Thiele, Bernhard Ø Palsson

Année:

2009

Langue:

english

Fichier:

PDF, 934 KB

english, 2009

A detailed genome-wide reconstruction of mouse metabolism based on human Recon 1

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 675 KB

english, 2010

Individualized therapy of HHT driven by network analysis of metabolomic profiles

Neema Jamshidi, Franklin J Miller, Jess Mandel, Timothy Evans, Michael D Kuo

Journal:

Kauffman, Kenneth J., Pajerowski, John David, Jamshidi, Neema, Palsson, Bernhard O., Edwards, Jeremy S.

Année:

2011

Langue:

english

Fichier:

PDF, 273 KB

english, 2011

Description and Analysis of Metabolic Connectivity and Dynamics in the Human Red Blood Cell

Journal:

Biophysical Journal

Année:

2002

Langue:

english

Fichier:

PDF, 2.23 MB

english, 2002

Flux-Concentration Duality in Dynamic Nonequilibrium Biological Networks

Jamshidi, Neema, Palsson, Bernhard Ø.

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 138 KB

english, 2009

Updating and curating metabolic pathways of TB

Slayden, Richard A., Jackson, Mary, Zucker, Jeremy, Ramirez, Melissa V., Dawson, Clinton C., Crew, Rebecca, Sampson, Nicole S., Thomas, Suzanne T., Jamshidi, Neema, Sisk, Peter, Caspi, Ron, Crick, Dea

Journal:

Tuberculosis

Année:

2013

Langue:

english

Fichier:

PDF, 1.01 MB

english, 2013

Xanthine Oxidase Activity Associated with Arterial Blood Pressure in Spontaneously Hypertensive Rats

Hidekazu Suzuki, Frank A. DeLano, Dale A. Parks, Neema Jamshidi, D. Neil Granger, Hiromasa Ishii, Makoto Suematsu, Benjamin W. Zweifach and Geert W. Schmid-Schonbein

Journal:

Proceedings of the National Academy of Sciences

Année:

1998

Langue:

english

Fichier:

PDF, 1017 KB

english, 1998

A genome-scale, constraint-based approach to systems biology of human metabolism

Mo, Monica L., Jamshidi, Neema, Palsson, Bernhard Ø.

Journal:

Molecular BioSystems

Année:

2007

Langue:

english

Fichier:

PDF, 395 KB

english, 2007

Illuminating Radiogenomic Characteristics of Glioblastoma Multiforme through Integration of MR Imaging, Messenger RNA Expression, and DNA Copy Number Variation

Jamshidi, Neema, Diehn, Maximilian, Bredel, Markus, Kuo, Michael D.

Journal:

Kuo, Michael D., Jamshidi, Neema

Année:

2014

Langue:

english

Fichier:

PDF, 2.05 MB

english, 2014

Behind the Numbers: Decoding Molecular Phenotypes with Radiogenomics—Guiding Principles and Technical Considerations

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2014

Breast Cancer: Radiogenomic Biomarker Reveals Associations among Dynamic Contrast-enhanced MR Imaging, Long Noncoding RNA, and Metastasis

Yamamoto, Shota, Han, Wonshik, Kim, Youngwoo, Du, Liutao, Jamshidi, Neema, Huang, Danshan, Kim, Jong Hyo, Kuo, Michael D.

Journal:

Jamshidi, Neema, Palsson, Bernhard Ø

Année:

2015

Langue:

english

Fichier:

PDF, 1.39 MB

english, 2015

Systems biology of SNPs

Journal:

Molecular Systems Biology

Année:

2006

Langue:

english

Fichier:

PDF, 253 KB

english, 2006

Parameter Optimization for Quantitative Signal-Concentration Mapping Using Spoiled Gradient Echo MRI

Hathout, Gasser, Jamshidi, Neema

Journal:

Radiology Research and Practice

Année:

2012

Langue:

english

Fichier:

PDF, 722 KB

english, 2012

Network reconstruction of platelet metabolism identifies metabolic signature for aspirin resistance

Thomas, Alex, Rahmanian, Sorena, Bordbar, Aarash, Palsson, Bernhard Ø., Jamshidi, Neema

Journal:

Scientific Reports

Année:

2014

Langue:

english

Fichier:

PDF, 2.16 MB

english, 2014

Nutritional Systems Biology Modeling: From Molecular Mechanisms to Physiology

de Graaf, Albert A., Freidig, Andreas P., De Roos, Baukje, Jamshidi, Neema, Heinemann, Matthias, Rullmann, Johan A.C., Hall, Kevin D., Adiels, Martin, van Ommen, Ben, Bourne, Philip E.

Journal:

Jamshidi, Neema, Palsson, Bernhard Ø., Miyano, Satoru

Année:

2009

Langue:

english

Fichier:

PDF, 441 KB

english, 2009

Top-Down Analysis of Temporal Hierarchy in Biochemical Reaction Networks

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 1.68 MB

english, 2008

Identification of Potential Pathway Mediation Targets in Toll-like Receptor Signaling

Li, Fan, Thiele, Ines, Jamshidi, Neema, Palsson, Bernhard Ø., Rao, Christopher

Journal:

Thiele, Ines, Jamshidi, Neema, Fleming, Ronan M. T., Palsson, Bernhard Ø., Ouzounis, Christos A.

Année:

2009

Langue:

english

Fichier:

PDF, 827 KB

english, 2009

Genome-Scale Reconstruction of Escherichia coli's Transcriptional and Translational Machinery: A Knowledge Base, Its Mathematical Formulation, and Its Functional Characterization

Journal:

Jamshidi, Neema, Jonasch, Eric, Zapala, Matthew, Korn, Ronald L., Aganovic, Lejla, Zhao, Hongjuan, Tumkur Sitaram, Raviprakash, Tibshirani, Robert J., Banerjee, Sudeep, Brooks, James D., Ljungberg, Bo

Année:

2009

Langue:

english

Fichier:

PDF, 1.59 MB

english, 2009

The Radiogenomic Risk Score: Construction of a Prognostic Quantitative, Noninvasive Image-based Molecular Assay for Renal Cell Carcinoma

Journal:

Eraly, Satish A., Liu, Henry C., Jamshidi, Neema, Nigam, Sanjay K.

Année:

2015

Langue:

english

Fichier:

PDF, 1.23 MB

english, 2015

Transcriptome-based reconstructions from the murine knockout suggest involvement of the urate transporter, URAT1 (slc22a12), in novel metabolic pathways

Journal:

Biochemistry and Biophysics Reports

Année:

2015

Langue:

english

Fichier:

PDF, 851 KB

english, 2015

Personalized Whole-Cell Kinetic Models of Metabolism for Discovery in Genomics and Pharmacodynamics

Bordbar, Aarash, McCloskey, Douglas, Zielinski, Daniel C., Sonnenschein, Nikolaus, Jamshidi, Neema, Palsson, Bernhard O.

Journal:

Cell Systems

Année:

2015

Langue:

english

Fichier:

PDF, 5.46 MB

english, 2015

The radiogenomic risk score stratifies outcomes in a renal cell cancer phase 2 clinical trial

Jamshidi, Neema, Jonasch, Eric, Zapala, Matthew, Korn, Ronald L., Brooks, James D., Ljungberg, Borje, Kuo, Michael D.

Journal:

European Radiology

Année:

2016

Langue:

english

Fichier:

PDF, 3.06 MB

english, 2016

Genome-scale network analysis of imprinted human metabolic genes

Sigurdsson, Martin, Jamshidi, Neema, Jonsson, Jon J., Palsson, Bernhard Ø.

Journal:

Epigenetics

Année:

2009

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2009

Formulating genome-scale kinetic models in the post-genome era

Jamshidi, Neema, Palsson, Bernhard Ø

Journal:

Molecular Systems Biology

Année:

2008

Langue:

english

Fichier:

PDF, 938 KB

english, 2008

Radiogenomic Analysis Demonstrates Associations between 18 F-Fluoro-2-Deoxyglucose PET, Prognosis, and Epithelial-Mesenchymal Transition in Non–Small Cell Lung Cancer

Yamamoto, Shota, Huang, Danshan, Du, Liutao, Korn, Ronald L., Jamshidi, Neema, Burnette, Barry L., Kuo, Michael D.

Journal:

Swann, Justine, Jamshidi, Neema, Lewis, Nathan E., Winzeler, Elizabeth A.

Année:

2016

Langue:

english

Fichier:

PDF, 1.86 MB

english, 2016

Systems analysis of host-parasite interactions

Journal:

Wiley Interdisciplinary Reviews: Systems Biology and Medicine

Année:

2015

Langue:

english

Fichier:

PDF, 508 KB

english, 2015

Transcriptome profiling reveals novel gene expression signatures and regulating transcription factors of TGF β -induced epithelial-to-mesenchymal transition

Du, Liutao, Yamamoto, Shota, Burnette, Barry L., Huang, Danshang, Gao, Kun, Jamshidi, Neema, Kuo, Michael D.

Journal:

Cancer Medicine

Année:

2016

Langue:

english

Fichier:

PDF, 1.33 MB

english, 2016

Construction and Evaluation of an Organic Anion Transporter 1 (OAT1)-Centered Metabolic Network

Liu, Henry C., Jamshidi, Neema, Chen, Yuchen, Eraly, Satish A., Cho, Sai Yee, Bhatnagar, Vibha, Wu, Wei, Bush, Kevin T., Abagyan, Ruben, Palsson, Bernhard O., Nigam, Sanjay K.

Journal:

Journal of Biological Chemistry

Année:

2016

Langue:

english

Fichier:

PDF, 2.83 MB

english, 2016

Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions

Bordbar, Aarash, Lewis, Nathan E, Schellenberger, Jan, Palsson, Bernhard Ø, Jamshidi, Neema

Journal:

Molecular Systems Biology

Année:

2010

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2010

Genomic Adequacy from Solid Tumor Core Needle Biopsies of ex Vivo Tissue and in Vivo Lung Masses: Prospective Study

Jamshidi, Neema, Huang, Danshan, Abtin, Fereidoun G., Loh, Christopher T., Kee, Stephen T., Suh, Robert D., Yamamoto, Shota, Das, Kingshuk, Dry, Sarah, Binder, Scott, Enzmann, Dieter R., Kuo, Michael

Journal:

Zielinski, Daniel C., Jamshidi, Neema, Corbett, Austin J., Bordbar, Aarash, Thomas, Alex, Palsson, Bernhard O.

Année:

2017

Langue:

english

Fichier:

PDF, 562 KB

english, 2017

Systems biology analysis of drivers underlying hallmarks of cancer cell metabolism

Journal:

Scientific Reports

Année:

2017

Langue:

english

Fichier:

PDF, 768 KB

english, 2017

Multiregional Radiogenomic Assessment of Prostate Microenvironments with Multiparametric MR Imaging and DNA Whole-Exome Sequencing of Prostate Glands with Adenocarcinoma

Jamshidi, Neema, Margolis, Daniel J., Raman, Steven, Huang, Jiaoti, Reiter, Robert E., Kuo, Michael D.

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 1.56 MB

english, 2017

Functional interrogation of Plasmodium genus metabolism identifies species- and stage-specific differences in nutrient essentiality and drug targeting

Abdel-Haleem, Alyaa M., Hefzi, Hooman, Mineta, Katsuhiko, Gao, Xin, Gojobori, Takashi, Palsson, Bernhard O., Lewis, Nathan E., Jamshidi, Neema, Nielsen, Jens

Journal:

Korean Journal of Radiology

Année:

2018

Langue:

english

Fichier:

PDF, 12.83 MB

english, 2018

Quality of Radiomic Features in Glioblastoma Multiforme: Impact of Semi-Automated Tumor Segmentation Software

Lee, Myungeun, Woo, Boyeong, Kuo, Michael D., Jamshidi, Neema, Kim, Jong Hyo

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 1.69 MB

english, 2017

The Emerging Facets of Non-Cancerous Warburg Effect

Abdel-Haleem, Alyaa M., Lewis, Nathan E., Jamshidi, Neema, Mineta, Katsuhiko, Gao, Xin, Gojobori, Takashi

Journal:

Frontiers in Endocrinology

Année:

2017

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2017

Cell scale host-pathogen modeling: another branch in the evolution of constraint-based methods

Jamshidi, Neema, Raghunathan, Anu

Journal:

Frontiers in Microbiology

Année:

2015

Langue:

english

Fichier:

PDF, 2.80 MB

english, 2015

Receptor-based Surrogate Subtypes and Discrepancies with Breast Cancer Intrinsic Subtypes: Implications for Image Biomarker Development

Jamshidi, Neema, Yamamoto, Shota, Gornbein, Jeffrey, Kuo, Michael D.

Journal: